species:   Artha
pid:       MI0019224
parent:    ath-MIR5648
paralog:   
locus:     1:11499384-11499883
matures:   ['UUUGGAAAUAUUUGGCUUGACU', 'UCAAGCCAAAUAUUCCAAACA']
srr:       SRR9216049
genome:    /Users/jax/+Genomes/Plant_genomes/Artha.TAIR10_chr_all.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216049.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216049.cram 1:11499384-11499883

0 out of bounds
1 alignments
1 proper strand
1 stranded perfect matches

                                                                                                                      *********************                                                                                                                                                                                                                              *********************                                                                                                                      
CUUCAUCAUCACUAGACUCAUGUUUUCUAACCUUUCUCAUUCCGUUAUGAAUCAUAGGUUGAAAGAUGGUAUGAUCUGUAGGGUCUCUUGGCAUUAAAACAUUGAUUAAAAGGUGUUUGCCUCUAUUUGCUUCAGAUUGUCUUUUUAAUGUUUGGAAAUAUUUGGCUUGACUCUGUAUGAAAAAAAAGUCAAGUUUCAAUCAAGUGAAUAUAUUGGAAAUUUAUAGCUUCCAAGUUUCUUUUUAAAGAUGGUUUUAAUCGAUAUAUAUUUGGAAGCUAUAUAUUCCUCUAAUUCACUUAAUUGAAACUUAAUUUUUUUUUCCAAAACAAAGUCAAGCCAAAUAUUCCAAACAUUGAAGCAACAAUCUGAAGAAAAUAGCGGCAUACGCCCUUUAGUUAGCCAAUGUUAAAAUGUCAAGAGACCAUGCAGAUUAGAUCCAACUUUCAAGCUAUUUUUUUUUAAGGAAUGUAAAAGGUUAAAAGACAUGAGUCUAGUGAUGA
.....(((((((((((((((((((((.((((((((..((((((.....(((..((((.(((((((.(((..(((((((((.((((((((((((((..(((((((((((((.(((((.((((.((((((.(((((((((((..(((((((((((((((.((((((((((((((.(((..(((((((((((.((((((((((.((((((((.((..((((...((((((((((((((......((((((....)))))).........))))))))))))))..))))..)))))))))).)))))))))).)))))))))))....))).)))))))))))))))))))))))))))))..))))))))))).)))))).)))).))))).))))))....)))))))..)))))))))))))).)))))))))...))).))))))).))))..))).....))))))..)))))))).)))))))))))))))))))))
------------------------------------------------------------------------------------------------------------------------------------------------------UUUGGAAAUAUUUGGCUUGACU---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=22 a=0 c
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCAAGCCAAAUAUUCCAAACA---------------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=0 c*
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AUCUGAAGAAAAUAGCGGC---------------------------------------------------------------------------------------------------------------------- l=19 a=1 ma
------------------------------------------------------------------------------------------------------------------------CUCUAUUUGCUUCAGAUUG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=19 a=0 ma*

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AUCUGAAGAAAAUAGCGGC---------------------------------------------------------------------------------------------------------------------- l=19 a=1 (ma)

mb-01011
ax-1010101
ku-01
ss-100001111110
fn-011
